BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035B02SP1|AL429996
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1066 1777 0.0
>3x_Contig1066
Length = 4816
Score = 1777 bits (895), Expect = 0.0
Identities = 897/899 (99%)
Strand = Plus / Minus
Query: 1 ccccaattgtgaattgcagatcttgcaaaagtgacgggtttctttcttttcgttaattgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2596 ccccaattgtgaattgcagatcttgcaaaagtgacgggtttctttcttttcgttaattgg 2537
Query: 61 tttaatgataataggtcagattcaaagccaattgcagctctttgcgcttctatatcttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2536 tttaatgataataggtcagattcaaagccaattgcagctctttgcgcttctatatcttgc 2477
Query: 121 tggaaacgtctttggaaaactctgttcaaacgtgaggatgcattatggttatcttgctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2476 tggaaacgtctttggaaaactctgttcaaacgtgaggatgcattatggttatcttgctct 2417
Query: 181 aagtcagcctcttgatttgttgattctgttccattcaaagccatgaaattctgttcttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2416 aagtcagcctcttgatttgttgattctgttccattcaaagccatgaaattctgttcttga 2357
Query: 241 tgattatgaacagtgttcaaaggttgcgccaacctccgatgatgaagaaggtatgaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2356 tgattatgaacagtgttcaaaggttgcgccaacctccgatgatgaagaaggtatgaagat 2297
Query: 301 ttcagtttatcaggaattttcttaaagccatcagcaataaaactaccagtcgttgaagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2296 ttcagtttatcaggaattttcttaaagccatcagcaataaaactaccagtcgttgaagct 2237
Query: 361 aacgttgaatcaaattctttttcattcaaagctatttggttatcccgaataattccattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2236 aacgttgaatcaaattctttttcattcaaagctatttggttatcccgaataattccattt 2177
Query: 421 tgttcaatctgttggtataacttccacattgagtacggcaaaaatggtgtataatcagta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2176 tgttcaatctgttggtataacttccacattgagtacggcaaaaatggtgtataatcagta 2117
Query: 481 gtaatatcttttgatttttctgagacaatgcccttgagaatagagaaatcttcttcgtct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2116 gtaatatcttttgatttttctgagacaatgcccttgagaatagagaaatcttcttcgtct 2057
Query: 541 ttcaaagcaagcyggaacttatcgagagaaagctgcttggatttattcaagtcaaagtca 600
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2056 ttcaaagcaagctggaacttatcgagagaaagctgcttggatttattcaagtcaaagtca 1997
Query: 601 tcataaggatatactggggttgggaattctgatgcaataggtttgtatttcccttcatac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1996 tcataaggatatactggggttgggaattctgatgcaataggtttgtatttcccttcatac 1937
Query: 661 tgtagtaattccttggacctttcatcaggtaaagatgcagcgctttcgggcaggtcttcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1936 tgtagtaattccttggacctttcatcaggtaaagatgcagcgctttcgggcaggtcttcc 1877
Query: 721 tccggtgttgttatcacggaagactgtttcttcgactcatctgaaataatatcttccgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1876 tccggtgttgttatcacggaagactgtttcttcgactcatctgaaataatatcttccgat 1817
Query: 781 tcatatccagatgactccggagagttttcaccgtttgagccaacattgagtgaatccact 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1816 tcatatccagatgactccggagagttttcaccgtttgagccaacattgagtgaatccact 1757
Query: 841 gtatcttctctggtagaaatttcatcatttaacaaatgcgamatatgttccaccttagg 899
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1756 gtatcttctctggtagaaatttcatcatttaacaaatgcgacatatgttccaccttagg 1698
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8391
Number of Sequences: 1807
Number of extensions: 8391
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)